{"id":18,"date":"2024-04-04T08:40:06","date_gmt":"2024-04-04T05:40:06","guid":{"rendered":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/edna-harbours-monitoring-activities\/"},"modified":"2024-04-04T08:40:50","modified_gmt":"2024-04-04T05:40:50","slug":"edna-harbours-monitoring-activities","status":"publish","type":"page","link":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/edna-harbours-monitoring-activities\/?lang=en","title":{"rendered":"eDNA and small harbour NIS monitoring activities"},"content":{"rendered":"

\n\tDevelopment of the eDNA method for biological monitoring in ports<\/strong>\n<\/p>\n

\n\teDNA-based invasive species monitoring is used to determine the presence of species-specific marker genes in seawater samples. The presence of a species-specific marker will be determined by quantification PCR analysis to detect the presence of ~100 nucleotide sequences. Water samples will be collected from different areas of the risk area. As a result of the project, a method will be developed that can be applied to new alien species risk areas in Estonia. The new information will make a significant contribution to the global development of alien species monitoring.\n<\/p>\n

\n\tIn 2022, eDNA samples were collected and are currently being analysed.\n<\/p>\n

\n\tIn 2023, the methodology for the detection of alien species on growth plates will be tested in at least two small Estonian harbours (e.g. K\u00f5iguste harbour). The methodology developed by HELCOM will be tested in the Estonian coastal waters.\n<\/p>\n

\n\t\u00a0\n<\/p>\n

\n\t\u00a0\n<\/p>\n

\n\tMonitoring of non-indigenous species using settlement panels<\/span><\/b>\n<\/p>\n

\n\tThe human-mediated introduction and establishment of non-indigenous species (NIS) in the marine environment are of worldwide concern. The main vectors for species introduction are maritime transport by either transport of organisms via ballast water or biofouling, and aquaculture. Further spread of species might also occur by smaller vessels and pleasure craft.\n<\/p>\n

\n\tPorts and harbours are assumed hotspots of introductions. Primary introductions occur in big ports via transoceanic cargo vessels, cruise ships, ferries or navy vessels. If direct sampling in the harbour of concern is unpractical, sampling is concentrated on smaller harbours and marinas nearby where sampling is more feasible.\n<\/p>\n

\n\tThe monitoring of NIS using settlement panels (as described in the HELCOM extended Rapid Assessment Survey \u2013 eRAS<\/b>), is a low-cost and effective method for detecting fouling NIS in harbours and leisure boat marinas.\n<\/p>\n

\n\tSettlement panels are deployed throughout the settlement season, from spring\/early summer until the end of summer\/beginning of autumn.\n<\/p>\n

\n\t\u00a0\n<\/p>\n

\n\tIn June 2023 Settement\u00a0plates were deployed for 3-4 months in K\u00f5iguste marina in Saaremaa and Noblessner marina in Tallinn:\n<\/p>\n

\n\t\"20230525_153135.jpg\"\u00a0\"20230525_153145.jpg\"\n<\/p>\n

\n\t\"20230608_135941.jpg\"\u00a0\"20230525_181141.jpg\"<\/p>\n","protected":false},"excerpt":{"rendered":"

Development of the eDNA method for biological monitoring in ports eDNA-based invasive species monitoring is used to determine the presence of species-specific marker genes in seawater samples. The presence of a species-specific marker will be determined by quantification PCR analysis …<\/p>\n","protected":false},"author":314,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"inline_featured_image":false,"footnotes":""},"class_list":["post-18","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/pages\/18","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/users\/314"}],"replies":[{"embeddable":true,"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/comments?post=18"}],"version-history":[{"count":1,"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/pages\/18\/revisions"}],"predecessor-version":[{"id":106,"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/pages\/18\/revisions\/106"}],"wp:attachment":[{"href":"https:\/\/sisu.ut.ee\/v66rliikidejakliimamuutustem6ju\/wp-json\/wp\/v2\/media?parent=18"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}