{"id":10,"date":"2024-04-04T08:51:36","date_gmt":"2024-04-04T05:51:36","guid":{"rendered":"https:\/\/sisu.ut.ee\/eukaryome\/dada2\/"},"modified":"2025-11-24T13:53:43","modified_gmt":"2025-11-24T11:53:43","slug":"dada2","status":"publish","type":"page","link":"https:\/\/sisu.ut.ee\/eukaryome\/dada2\/","title":{"rendered":"DADA2"},"content":{"rendered":"

The FASTA releases may be used for taxonomy assignment via the DADA2 classifier. The files can be downloaded by clicking on the hyperlinks in the following table.<\/span><\/span><\/span><\/span> <\/p>\n\n\n\n

Important note: For unzipping files in Windows, install\u00a07-Zip software<\/a>.<\/span> If you are working in HPC, use the P7zip package <\/a>to unzip the files.<\/strong><\/p>\n\n\n\n

Version<\/strong><\/td>\u00a0File name<\/strong><\/td>File<\/strong> size<\/strong><\/td>Number of sequences<\/strong><\/td>Notes<\/strong><\/td><\/tr>
2.0<\/td>DADA2_EUK_ITS<\/a><\/td>100 MB \u00a0<\/td>1,597,426<\/td>

Reference\u00a0\u00a0ITS sequences<\/p><\/td><\/tr>

2.0<\/td>DADA2_EUK_ITS_99<\/a><\/td>83 MB<\/td>1,300,711<\/td>Reference ITS sequences (clustered 99%)<\/td><\/tr>
2.0<\/td>DADA2_EUK_long<\/a><\/td>

48 MB<\/p><\/td>

193,705<\/td>

Reference \u201cSSU-ITS-LSU\u201d sequences combined<\/p><\/td><\/tr>

2.0<\/td>DADA2_EUK_LSU<\/a><\/td>106 MB<\/td>377,679<\/td>Reference LSU sequences<\/td><\/tr>
2.0<\/td>DADA2_EUK_SSU<\/a><\/td>56 MB<\/td>353,797<\/td>Reference SSU sequences<\/td><\/tr><\/tbody><\/table><\/figure>\n\n\n\n

<\/p>\n","protected":false},"excerpt":{"rendered":"

The FASTA releases may be used for taxonomy assignment via the DADA2 classifier. The files can be downloaded by clicking on the hyperlinks in the following table. Important note: For unzipping files in Windows, install\u00a07-Zip software. If you are working …<\/p>\n","protected":false},"author":163,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"inline_featured_image":false,"footnotes":""},"class_list":["post-10","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/pages\/10","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/users\/163"}],"replies":[{"embeddable":true,"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/comments?post=10"}],"version-history":[{"count":30,"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/pages\/10\/revisions"}],"predecessor-version":[{"id":849,"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/pages\/10\/revisions\/849"}],"wp:attachment":[{"href":"https:\/\/sisu.ut.ee\/eukaryome\/wp-json\/wp\/v2\/media?parent=10"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}